
Build a graph object from Two numeric matrix
Source:R/build_graph_from_double_mat_with_module.R
build_graph_from_double_mat_with_module.RdBuild a graph object from Two numeric matrix
Usage
build_graph_from_double_mat_with_module(
mat1,
mat2,
node_annotation = NULL,
directed = F,
top_modules = 15,
seed = 1115
)Arguments
- mat1
Numeric matrix. A numeric matrix with samples in colums and variables in rows
- mat2
Numeric matrix. A numeric matrix with samples in colums and variables in rows
- node_annotation
Data frame. Optional node annotation table, containing metadata such as taxonomy or functional categories.
- directed
Logical (default:
FALSE). Whether edges between nodes are directed.- top_modules
Integer. Number of top-ranked modules to retain for downstream visualization or analysis.
- seed
Integer (default = 1115). Random seed for reproducibility.