
Build a graph object from a graph object
Source:R/build_graph_from_igraph.R
build_graph_from_igraph.RdBuild a graph object from a graph object
Usage
build_graph_from_igraph(
igraph,
module.method = c("Fast_greedy", "Walktrap", "Edge_betweenness", "Spinglass"),
node_annotation = NULL,
top_modules = 15,
seed = 1115
)Arguments
- igraph
a igraph object
- module.method
Character. Network community detection (module identification) method. Options include "Fast_greedy", "Walktrap", "Edge_betweenness", and "Spinglass".
- node_annotation
Data Frame The annotation file of nodes in network
- top_modules
Integer. Number of top-ranked modules to select.
- seed
Integer (default = 1115). Random seed for reproducibility.